Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-deoxy-glucuronate isomerase | NCTC9117_01346 | Not Available | Positive | 1073816 - 1074475 | 24943.4 |
| uncharacterised protein | NCTC9117_01347 | Not Available | Positive | 1074601 - 1074723 | 5010.23 |
| uncharacterised protein | NCTC9117_01348 | Not Available | Negative | 1075627 - 1076052 | 16257.5 |
| papx protein | NCTC9117_01349 | Not Available | Negative | 1076724 - 1077224 | 19077.8 |
| transposase | NCTC9117_01350 | Not Available | Positive | 1077854 - 1078264 | 15244.2 |
| transposase | NCTC9117_01351 | Not Available | Positive | 1078261 - 1078359 | 3416.24 |
| transposase | NCTC9117_01352 | Not Available | Positive | 1078422 - 1078721 | 11543.8 |
| is3 element transposase | NCTC9117_01353 | Not Available | Positive | 1078771 - 1079424 | 24958.8 |
| uncharacterised protein | NCTC9117_01354 | Not Available | Negative | 1079602 - 1079883 | 10988.9 |
| putative dead-box helicase-like protein | NCTC9117_01355 | Not Available | Negative | 1080069 - 1085579 | 206159.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




