Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1298940 bp
Thymine Count
1296056 bp
Guanine Count
1342267 bp
Cytosine Count
1348622 bp
Genome Length
5285885 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
538 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | NCTC9058_01699 | Not Available | Positive | 1650413 - 1652443 | 75774.6 |
| class i and ii aminotransferase | NCTC9058_01700 | Not Available | Positive | 1652621 - 1653874 | 46688.9 |
| electron transport protein ysaa | NCTC9058_01701 | Not Available | Negative | 1654025 - 1654498 | 17435.1 |
| dna-binding transcriptional repressor | NCTC9058_01702 | Not Available | Negative | 1654600 - 1655448 | 31094.6 |
| 2,3-diketo-l-gulonate reductase | NCTC9058_01703 | Not Available | Positive | 1655649 - 1656647 | 36574.9 |
| beta-galactosidase | NCTC9058_01704 | Not Available | Positive | 1656659 - 1657126 | 17551.1 |
| 2,3-diketo-l-gulonate trap transporter, small permease protein | NCTC9058_01705 | Not Available | Positive | 1657244 - 1657717 | 17516.9 |
| 2,3-diketo-l-gulonate trap transporter, large permease protein | NCTC9058_01706 | Not Available | Positive | 1657720 - 1658997 | 45371.0 |
| 2,3-diketo-l-gulonate trap transporter, substrate-binding periplasmic protein | NCTC9058_01707 | Not Available | Positive | 1659010 - 1659996 | 35972.1 |
| l-xylulose/3-keto-l-gulonate kinase | NCTC9058_01708 | Not Available | Positive | 1660000 - 1661496 | 55100.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




