Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1298940 bp
Thymine Count
1296056 bp
Guanine Count
1342267 bp
Cytosine Count
1348622 bp
Genome Length
5285885 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
538 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter, substrate-binding protein | NCTC9058_01558 | Not Available | Positive | 1494240 - 1495814 | 58791.3 |
| nickel abc-transporter, permease protein | NCTC9058_01559 | Not Available | Positive | 1495814 - 1496758 | 35250.3 |
| nickel abc transporter, permease protein | NCTC9058_01560 | Not Available | Positive | 1496755 - 1497588 | 30363.8 |
| nickel abc transporter, atp-binding protein | NCTC9058_01561 | Not Available | Positive | 1497588 - 1498352 | 26835.1 |
| nickel abc transporter, atp-binding protein | NCTC9058_01562 | Not Available | Positive | 1498349 - 1499155 | 29700.5 |
| nickel responsive regulator | NCTC9058_01563 | Not Available | Positive | 1499161 - 1499562 | 15094.7 |
| hicb family protein | NCTC9058_01564 | Not Available | Negative | 1499682 - 1500041 | 13403.0 |
| hica-like protein | NCTC9058_01565 | Not Available | Negative | 1500038 - 1500313 | 10200.5 |
| putative transporter subunit: membrane component of abc superfamily | NCTC9058_01566 | Not Available | Negative | 1500386 - 1501510 | 41119.3 |
| putative type i secretion system, atp-binding protein | NCTC9058_01567 | Not Available | Negative | 1501510 - 1504245 | 100791.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




