Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1298940 bp
Thymine Count
1296056 bp
Guanine Count
1342267 bp
Cytosine Count
1348622 bp
Genome Length
5285885 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
538 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane porin hofq | NCTC9058_01467 | Not Available | Negative | 1396133 - 1397341 | 43550.3 |
| protein involved in utilization of dna as a carbon source | NCTC9058_01468 | Not Available | Negative | 1397283 - 1397687 | 15099.1 |
| protein involved in utilization of dna as a carbon source | NCTC9058_01469 | Not Available | Negative | 1397677 - 1398117 | 16877.1 |
| putative fimbrial assembly protein | NCTC9058_01470 | Not Available | Negative | 1398101 - 1398640 | 20797.1 |
| pilus assembly protein | NCTC9058_01471 | Not Available | Negative | 1398640 - 1399419 | 29001.8 |
| penicillin-binding protein 1a | NCTC9058_01472 | Not Available | Positive | 1399539 - 1402091 | 93598.4 |
| adp compounds hydrolase | NCTC9058_01473 | Not Available | Negative | 1402256 - 1402816 | 21154.4 |
| membrane protein igaa | NCTC9058_01474 | Not Available | Positive | 1403136 - 1405271 | 79490.4 |
| putative hydrolase | NCTC9058_01475 | Not Available | Positive | 1405336 - 1406004 | 25400.2 |
| heat shock protein | NCTC9058_01476 | Not Available | Positive | 1406015 - 1406416 | 15496.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




