Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1298940 bp
Thymine Count
1296056 bp
Guanine Count
1342267 bp
Cytosine Count
1348622 bp
Genome Length
5285885 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
538 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine racemase like protein | NCTC9058_01457 | Not Available | Negative | 1386502 - 1387665 | 42296.8 |
| prd domain protein,/aha_3910 family | NCTC9058_01458 | Not Available | Negative | 1387749 - 1388111 | 13528.5 |
| amino acid transporter | NCTC9058_01459 | Not Available | Negative | 1388128 - 1389033 | 33479.4 |
| tryptophanyl-trna synthetase | NCTC9058_01460 | Not Available | Negative | 1389302 - 1390306 | 37439.9 |
| phosphoglycolate phosphatase | NCTC9058_01461 | Not Available | Negative | 1390299 - 1391057 | 27348.7 |
| ribulose-phosphate 3-epimerase | NCTC9058_01462 | Not Available | Negative | 1391050 - 1391727 | 24555.7 |
| dna adenine methylase | NCTC9058_01463 | Not Available | Negative | 1391745 - 1392581 | 32087.2 |
| damx protein | NCTC9058_01464 | Not Available | Negative | 1392688 - 1393974 | 46138.3 |
| 3-dehydroquinate synthase | NCTC9058_01465 | Not Available | Negative | 1394066 - 1395154 | 38856.3 |
| shikimate kinase i | NCTC9058_01466 | Not Available | Negative | 1395211 - 1395732 | 19539.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




