Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1298940 bp
Thymine Count
1296056 bp
Guanine Count
1342267 bp
Cytosine Count
1348622 bp
Genome Length
5285885 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
538 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna topoisomerase | NCTC9058_01356 | Not Available | Negative | 1305979 - 1306521 | 19845.9 |
| protein smg | NCTC9058_01357 | Not Available | Negative | 1306550 - 1307023 | 18484.2 |
| dna protecting protein dpra | NCTC9058_01358 | Not Available | Negative | 1306995 - 1308119 | 40957.3 |
| polypeptide deformylase | NCTC9058_01359 | Not Available | Positive | 1308249 - 1308758 | 19329.6 |
| methionyl-trna formyltransferase | NCTC9058_01360 | Not Available | Positive | 1308773 - 1309720 | 34156.4 |
| ribosomal rna small subunit methyltransferase b | NCTC9058_01361 | Not Available | Positive | 1309766 - 1311055 | 48322.2 |
| trk system potassium uptake protein trka | NCTC9058_01362 | Not Available | Positive | 1311077 - 1312453 | 50370.8 |
| large-conductance mechanosensitive channel | NCTC9058_01363 | Not Available | Positive | 1312583 - 1312993 | 14927.7 |
| regulator | NCTC9058_01364 | Not Available | Negative | 1312990 - 1313208 | 8171.86 |
| putative zn(ii)-responsive regulator | NCTC9058_01365 | Not Available | Negative | 1313264 - 1313689 | 16180.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




