Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1298940 bp
Thymine Count
1296056 bp
Guanine Count
1342267 bp
Cytosine Count
1348622 bp
Genome Length
5285885 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
538 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxyglucarate aldolase | NCTC9058_01206 | Not Available | Negative | 1161406 - 1162176 | 27385.6 |
| galactarate transporter | NCTC9058_01207 | Not Available | Negative | 1162192 - 1163526 | 49012.0 |
| galactarate dehydratase | NCTC9058_01208 | Not Available | Positive | 1163901 - 1165472 | 56404.9 |
| htra suppressor protein | NCTC9058_01209 | Not Available | Positive | 1165621 - 1165956 | 12359.7 |
| toxin of the sohb(prlf)-yhav toxin-antitoxin system | NCTC9058_01210 | Not Available | Positive | 1165956 - 1166201 | 9092.8 |
| insertion element protein | NCTC9058_01211 | Not Available | Negative | 1166285 - 1166500 | 7397.75 |
| is1 transposase | NCTC9058_01212 | Not Available | Positive | 1166572 - 1166949 | 14931.2 |
| n-acetylgalactosamine-specific pts system eiic component 1 | NCTC9058_01213 | Not Available | Positive | 1167027 - 1167656 | 22452.7 |
| pts system n-acetylgalactosamine-specific transporter subunit iid | NCTC9058_01214 | Not Available | Positive | 1167646 - 1168437 | 28976.1 |
| putative galactosamine-6-phosphate isomerase | NCTC9058_01215 | Not Available | Positive | 1168492 - 1169193 | 25888.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




