Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1298940 bp
Thymine Count
1296056 bp
Guanine Count
1342267 bp
Cytosine Count
1348622 bp
Genome Length
5285885 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
538 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane channel protein | NCTC9058_01110 | Not Available | Positive | 1061949 - 1063430 | 53743.7 |
| putative inner membrane protein | NCTC9058_01111 | Not Available | Positive | 1063578 - 1064249 | 23480.7 |
| glutathionylspermidine synthase | NCTC9058_01112 | Not Available | Positive | 1064255 - 1065415 | 45028.4 |
| putative aromatic ring-opening dioxygenase | NCTC9058_01113 | Not Available | Negative | 1065453 - 1066268 | 29905.0 |
| zinc transporter zupt | NCTC9058_01114 | Not Available | Positive | 1066384 - 1067157 | 26486.5 |
| uncharacterised protein | NCTC9058_01115 | Not Available | Negative | 1067214 - 1067384 | 6810.31 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | NCTC9058_01116 | Not Available | Negative | 1067646 - 1068299 | 23354.9 |
| yqic protein | NCTC9058_01118 | Not Available | Positive | 1068673 - 1068963 | 11276.7 |
| fimbrial protein | NCTC9058_01119 | Not Available | Positive | 1069247 - 1069798 | 19394.0 |
| outer membrane usher protein | NCTC9058_01120 | Not Available | Positive | 1069849 - 1072356 | 93671.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




