Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1298940 bp
Thymine Count
1296056 bp
Guanine Count
1342267 bp
Cytosine Count
1348622 bp
Genome Length
5285885 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
538 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuculose phosphate aldolase | NCTC9058_00868 | Not Available | Negative | 807499 - 808146 | 23776.7 |
| l-fucose permease | NCTC9058_00869 | Not Available | Positive | 808693 - 810009 | 47547.6 |
| l-fucose isomerase | NCTC9058_00870 | Not Available | Positive | 810042 - 811817 | 64950.2 |
| l-fuculokinase | NCTC9058_00871 | Not Available | Positive | 811926 - 813344 | 52247.6 |
| putative fuscose transport/metabolism protein | NCTC9058_00872 | Not Available | Positive | 813346 - 813768 | 15474.0 |
| fucr family transcriptional regulator | NCTC9058_00873 | Not Available | Positive | 813826 - 814557 | 27363.7 |
| putative rna 2'-o-ribose methyltransferase | NCTC9058_00874 | Not Available | Negative | 814601 - 815701 | 41921.5 |
| inner membrane protein ygdd | NCTC9058_00875 | Not Available | Negative | 815694 - 816089 | 14334.0 |
| putative transcriptional regulator of glycine cleavage system | NCTC9058_00876 | Not Available | Negative | 816108 - 817025 | 34403.4 |
| putative lipoprotein | NCTC9058_00878 | Not Available | Negative | 817376 - 817603 | 8174.67 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




