Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8985 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215265 bp
Thymine Count
1216631 bp
Guanine Count
1251908 bp
Cytosine Count
1249317 bp
Genome Length
4933121 bp
Protein-coding Genes
6202 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase fad-binding subunit | NCTC8985_05633 | Not Available | Negative | 4178473 - 4179351 | 31558.6 |
| xanthine dehydrogenase subunit xdha | NCTC8985_05634 | Not Available | Negative | 4179362 - 4179988 | 22614.7 |
| xanthine dehydrogenase subunit xdha | NCTC8985_05635 | Not Available | Negative | 4180018 - 4180530 | 18711.6 |
| xanthine dehydrogenase subunit xdha | NCTC8985_05636 | Not Available | Negative | 4180503 - 4181657 | 42192.1 |
| lipoprotein yger | NCTC8985_05637 | Not Available | Positive | 4182072 - 4182827 | 26540.0 |
| Trna-gly | Not Available | Not Available | Positive | 4182906 - 4182979 | Not Available |
| protein | NCTC8985_05639 | Not Available | Positive | 4183213 - 4184175 | 35904.9 |
| uncharacterised protein | NCTC8985_05640 | Not Available | Positive | 4184577 - 4184819 | 8865.72 |
| type iii secretion system protein spao | NCTC8985_05641 | Not Available | Positive | 4184951 - 4185316 | 13693.6 |
| yscq/hrcq family type iii secretion apparatus protein | NCTC8985_05642 | Not Available | Positive | 4185557 - 4185655 | 4077.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





