Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8985 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215265 bp
Thymine Count
1216631 bp
Guanine Count
1251908 bp
Cytosine Count
1249317 bp
Genome Length
4933121 bp
Protein-coding Genes
6202 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | NCTC8985_05409 | Not Available | Positive | 4005391 - 4005678 | 10946.1 |
| hydrogenase-2 small chain | NCTC8985_05410 | Not Available | Positive | 4005867 - 4006985 | 39654.3 |
| hydrogenase-2 subunit | NCTC8985_05411 | Not Available | Positive | 4006988 - 4007974 | 36049.0 |
| ni/fe-hydrogenase 2 b-type cytochrome subunit | NCTC8985_05412 | Not Available | Positive | 4007964 - 4009142 | 43604.7 |
| hydrogenase-2 large subunit | NCTC8985_05413 | Not Available | Positive | 4009139 - 4010842 | 62494.6 |
| hydrogenase 2 maturation protease | NCTC8985_05414 | Not Available | Positive | 4010842 - 4011336 | 17724.8 |
| hydrogenase-2 component protein | NCTC8985_05415 | Not Available | Positive | 4011329 - 4011817 | 17964.7 |
| hydrogenase nickel incorporation protein hybf | NCTC8985_05416 | Not Available | Positive | 4011810 - 4012151 | 12698.1 |
| hydrogenase-2 component protein | NCTC8985_05417 | Not Available | Positive | 4012164 - 4012412 | 8808.67 |
| glutathione s-transferase | NCTC8985_05418 | Not Available | Negative | 4012535 - 4013401 | 32439.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





