Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8985 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215265 bp
Thymine Count
1216631 bp
Guanine Count
1251908 bp
Cytosine Count
1249317 bp
Genome Length
4933121 bp
Protein-coding Genes
6202 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | NCTC8985_04947 | Not Available | Positive | 3675582 - 3675782 | 7599.17 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | NCTC8985_04948 | Not Available | Positive | 3675877 - 3676467 | 20854.1 |
| protein slyx | NCTC8985_04949 | Not Available | Negative | 3676516 - 3676734 | 8214.8 |
| fkbp-type peptidyl-prolyl isomerase | NCTC8985_04950 | Not Available | Positive | 3676954 - 3677682 | 26688.7 |
| putative dna-binding transcriptional regulator | NCTC8985_04951 | Not Available | Positive | 3678051 - 3678653 | 22292.9 |
| trna 2-thiouridine synthesizin protein d (sulfurtransferase) | NCTC8985_04952 | Not Available | Positive | 3678653 - 3679039 | 13653.1 |
| trna 2-thiouridine synthesizing protein c | NCTC8985_04953 | Not Available | Positive | 3679039 - 3679398 | 13035.7 |
| trna 2-thiouridine synthesizing protein b | NCTC8985_04954 | Not Available | Positive | 3679406 - 3679693 | 10692.9 |
| 30s ribosomal protein s12 | NCTC8985_04955 | Not Available | Positive | 3679819 - 3680193 | 13737.9 |
| 30s ribosomal protein s7 | NCTC8985_04956 | Not Available | Positive | 3680290 - 3680760 | 17605.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





