Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8985 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215265 bp
Thymine Count
1216631 bp
Guanine Count
1251908 bp
Cytosine Count
1249317 bp
Genome Length
4933121 bp
Protein-coding Genes
6202 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1a | NCTC8985_04887 | Not Available | Negative | 3635355 - 3636464 | 40891.6 |
| penicillin-binding protein 1a | NCTC8985_04888 | Not Available | Negative | 3636406 - 3636696 | 10894.4 |
| pilus assembly protein | NCTC8985_04889 | Not Available | Positive | 3636816 - 3637100 | 10712.0 |
| pilus assembly protein | NCTC8985_04890 | Not Available | Positive | 3637087 - 3637596 | 18436.8 |
| putative fimbrial assembly protein | NCTC8985_04891 | Not Available | Positive | 3637596 - 3638000 | 15534.9 |
| protein involved in utilization of dna as a carbon source | NCTC8985_04892 | Not Available | Positive | 3638122 - 3638238 | 4431.32 |
| protein involved in utilization of dna as a carbon source | NCTC8985_04893 | Not Available | Positive | 3638553 - 3638957 | 15099.1 |
| outer membrane porin hofq | NCTC8985_04894 | Not Available | Positive | 3638899 - 3639318 | 15137.0 |
| outer membrane porin hofq | NCTC8985_04895 | Not Available | Positive | 3639390 - 3639824 | 15741.0 |
| outer membrane porin hofq | NCTC8985_04896 | Not Available | Positive | 3639779 - 3640108 | 12191.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





