Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8985 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215265 bp
Thymine Count
1216631 bp
Guanine Count
1251908 bp
Cytosine Count
1249317 bp
Genome Length
4933121 bp
Protein-coding Genes
6202 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system effector, hcp1 family | NCTC8985_04806 | Not Available | Negative | 3573156 - 3573539 | 14778.7 |
| n-acetyltransferase gcn5 | NCTC8985_04807 | Not Available | Negative | 3574033 - 3574515 | 18470.5 |
| putative oxidoreductase | NCTC8985_04809 | Not Available | Positive | 3574936 - 3575049 | 4390.15 |
| putative oxidoreductase | NCTC8985_04810 | Not Available | Positive | 3575121 - 3575456 | 12397.9 |
| putative oxidoreductase | NCTC8985_04811 | Not Available | Positive | 3575481 - 3575669 | 7010.75 |
| pirin-related protein | NCTC8985_04812 | Not Available | Positive | 3576016 - 3576195 | 6704.77 |
| pirin-related protein | NCTC8985_04813 | Not Available | Positive | 3576200 - 3576712 | 19271.7 |
| gluconate utilization system gnt-i transcriptional repressor | NCTC8985_04814 | Not Available | Positive | 3576936 - 3577931 | 36371.2 |
| gluconate kinase | NCTC8985_04815 | Not Available | Positive | 3578070 - 3578597 | 19544.4 |
| low-affinity gluconate transporter | NCTC8985_04816 | Not Available | Positive | 3578601 - 3579830 | 42538.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





