Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8985 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215265 bp
Thymine Count
1216631 bp
Guanine Count
1251908 bp
Cytosine Count
1249317 bp
Genome Length
4933121 bp
Protein-coding Genes
6202 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd-family secretion protein | NCTC8985_04579 | Not Available | Positive | 3379704 - 3380840 | 41990.8 |
| uncharacterised protein | NCTC8985_04580 | Not Available | Negative | 3381300 - 3381617 | 11859.4 |
| uncharacterised protein | NCTC8985_04581 | Not Available | Negative | 3382444 - 3382905 | 17950.5 |
| rhs protein (modular protein) | NCTC8985_04582 | Not Available | Negative | 3382917 - 3383855 | 35132.4 |
| lyase containing heat-repeat protein | NCTC8985_04583 | Not Available | Negative | 3384001 - 3384744 | 28325.4 |
| protein | NCTC8985_04584 | Not Available | Negative | 3384849 - 3385232 | 14531.6 |
| yd repeat-containing protein | NCTC8985_04585 | Not Available | Negative | 3385204 - 3386757 | 58996.0 |
| h repeat-associated protein | NCTC8985_04586 | Not Available | Negative | 3386735 - 3387871 | 43130.9 |
| rhs core protein with extension | NCTC8985_04587 | Not Available | Negative | 3387975 - 3388853 | 33648.9 |
| yd repeat-containing protein | NCTC8985_04588 | Not Available | Negative | 3388850 - 3389956 | 41199.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





