Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8985 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215265 bp
Thymine Count
1216631 bp
Guanine Count
1251908 bp
Cytosine Count
1249317 bp
Genome Length
4933121 bp
Protein-coding Genes
6202 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam domain-containing protein | NCTC8985_04436 | Not Available | Positive | 3270533 - 3270931 | 13787.4 |
| putative phosphatase | NCTC8985_04437 | Not Available | Positive | 3271046 - 3271858 | 29707.8 |
| putative lipoprotein | NCTC8985_04438 | Not Available | Negative | 3271904 - 3272560 | 24170.9 |
| galactonate operon transcriptional repressor | NCTC8985_04439 | Not Available | Positive | 3272838 - 3273527 | 26107.2 |
| 2-dehydro-3-deoxygalactonokinase | NCTC8985_04440 | Not Available | Positive | 3273524 - 3273853 | 12447.9 |
| 2-dehydro-3-deoxygalactonokinase | NCTC8985_04441 | Not Available | Positive | 3274077 - 3274415 | 12122.7 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | NCTC8985_04442 | Not Available | Positive | 3274388 - 3274915 | 18461.6 |
| galactonate dehydratase | NCTC8985_04443 | Not Available | Positive | 3275004 - 3275591 | 21729.2 |
| galactonate dehydratase | NCTC8985_04444 | Not Available | Positive | 3275601 - 3276032 | 15822.1 |
| d-galactonate transporter | NCTC8985_04445 | Not Available | Positive | 3276271 - 3277404 | 42131.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





