Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8985 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215265 bp
Thymine Count
1216631 bp
Guanine Count
1251908 bp
Cytosine Count
1249317 bp
Genome Length
4933121 bp
Protein-coding Genes
6202 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| b12-dependent methionine synthase | NCTC8985_03980 | Not Available | Negative | 2917085 - 2918461 | 49963.6 |
| iclr family transcriptional regulator | NCTC8985_03981 | Not Available | Positive | 2918661 - 2918996 | 11888.5 |
| iclr family transcriptional regulator | NCTC8985_03982 | Not Available | Positive | 2918996 - 2919349 | 12914.5 |
| iclr family transcriptional regulator | NCTC8985_03983 | Not Available | Positive | 2919306 - 2919530 | 8230.86 |
| putative acetyl-coa synthase regulator | NCTC8985_03984 | Not Available | Positive | 2919802 - 2921022 | 46637.2 |
| t3ss effector-like protein espl | NCTC8985_03985 | Not Available | Positive | 2921019 - 2921375 | 13518.2 |
| isocitrate dehydrogenase kinase/phosphatase | NCTC8985_03986 | Not Available | Negative | 2921344 - 2923080 | 67674.3 |
| isocitrate lyase | NCTC8985_03987 | Not Available | Negative | 2923361 - 2924665 | 47524.1 |
| malate synthase | NCTC8985_03988 | Not Available | Negative | 2924695 - 2926296 | 60349.1 |
| homoserine o-succinyltransferase | NCTC8985_03989 | Not Available | Negative | 2926565 - 2927494 | 35701.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





