Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8985 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215265 bp
Thymine Count
1216631 bp
Guanine Count
1251908 bp
Cytosine Count
1249317 bp
Genome Length
4933121 bp
Protein-coding Genes
6202 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aig2 family protein | NCTC8985_03653 | Not Available | Negative | 2668807 - 2669112 | 11397.4 |
| translocation and assembly module for autotransporter export, inner membrane subunit | NCTC8985_03654 | Not Available | Negative | 2669115 - 2670755 | 58919.1 |
| translocation and assembly module for autotransporter export, inner membrane subunit | NCTC8985_03655 | Not Available | Negative | 2671273 - 2672895 | 59052.2 |
| putative outer membrane protein assembly factor | NCTC8985_03656 | Not Available | Negative | 2672892 - 2674625 | 64799.7 |
| methionine sulfoxide reductase a | NCTC8985_03657 | Not Available | Positive | 2674831 - 2675469 | 23316.3 |
| putative transporter | NCTC8985_03659 | Not Available | Positive | 2675792 - 2677135 | 49783.6 |
| conserved protein, duf1107 family | NCTC8985_03660 | Not Available | Negative | 2677197 - 2677403 | 8072.24 |
| protein ytfj | NCTC8985_03661 | Not Available | Positive | 2677728 - 2678285 | 20617.9 |
| cysq protein | NCTC8985_03662 | Not Available | Negative | 2678275 - 2679015 | 27191.4 |
| bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein | NCTC8985_03663 | Not Available | Positive | 2679205 - 2681148 | 70851.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





