Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8985 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215265 bp
Thymine Count
1216631 bp
Guanine Count
1251908 bp
Cytosine Count
1249317 bp
Genome Length
4933121 bp
Protein-coding Genes
6202 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-rssb factor | NCTC8985_02810 | Not Available | Negative | 2036136 - 2036396 | 9938.05 |
| d-alanine--d-alanine ligase | NCTC8985_02811 | Not Available | Positive | 2037105 - 2037644 | 19590.6 |
| d-alanine--d-alanine ligase | NCTC8985_02812 | Not Available | Positive | 2037661 - 2037954 | 10588.9 |
| putative membrane protein yaiz | NCTC8985_02813 | Not Available | Negative | 2037978 - 2038190 | 8097.92 |
| inner membrane protein | NCTC8985_02814 | Not Available | Positive | 2038450 - 2038758 | 11425.2 |
| putative lipoprotein | NCTC8985_02815 | Not Available | Negative | 2038817 - 2039911 | 40345.4 |
| putative microcin b17 uptake protein | NCTC8985_02816 | Not Available | Negative | 2039924 - 2040415 | 18697.9 |
| putative microcin b17 uptake protein | NCTC8985_02817 | Not Available | Negative | 2040471 - 2040839 | 14091.1 |
| putative microcin b17 uptake protein | NCTC8985_02818 | Not Available | Negative | 2040788 - 2041141 | 13559.6 |
| uncharacterised protein | NCTC8985_02819 | Not Available | Positive | 2041346 - 2041447 | 3919.98 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





