Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8985 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215265 bp
Thymine Count
1216631 bp
Guanine Count
1251908 bp
Cytosine Count
1249317 bp
Genome Length
4933121 bp
Protein-coding Genes
6202 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase | NCTC8985_02405 | Not Available | Positive | 1753805 - 1754551 | 26853.2 |
| d-alanyl-d-alanine carboxypeptidase | NCTC8985_02406 | Not Available | Positive | 1754548 - 1754931 | 14627.8 |
| protein ybed | NCTC8985_02407 | Not Available | Positive | 1755041 - 1755265 | 8267.88 |
| lipoate-protein ligase b | NCTC8985_02408 | Not Available | Positive | 1755471 - 1756046 | 21310.8 |
| lysr family transcriptional regulator | NCTC8985_02409 | Not Available | Positive | 1756305 - 1756817 | 18851.9 |
| lysr family transcriptional regulator | NCTC8985_02410 | Not Available | Positive | 1756946 - 1757260 | 12165.8 |
| lipoyl synthase lipa | NCTC8985_02411 | Not Available | Positive | 1757469 - 1758434 | 36073.8 |
| sec-independent protein translocase protein | NCTC8985_02412 | Not Available | Negative | 1758535 - 1758738 | 7024.71 |
| amidase | NCTC8985_02413 | Not Available | Negative | 1758867 - 1759655 | 28683.0 |
| protein crcb | NCTC8985_02414 | Not Available | Positive | 1759748 - 1760131 | 13766.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





