Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8985 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215265 bp
Thymine Count
1216631 bp
Guanine Count
1251908 bp
Cytosine Count
1249317 bp
Genome Length
4933121 bp
Protein-coding Genes
6202 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family protein | NCTC8985_02374 | Not Available | Negative | 1728612 - 1729463 | 30225.2 |
| glutamate/aspartate transport system permease | NCTC8985_02376 | Not Available | Positive | 1731087 - 1731737 | 23989.2 |
| glutamate/aspartate abc transporter, permease protein | NCTC8985_02377 | Not Available | Positive | 1731737 - 1732411 | 24916.2 |
| glutamate/aspartate abc transporter atp-binding protein | NCTC8985_02378 | Not Available | Positive | 1732411 - 1733136 | 26662.7 |
| pyrimidine-specific ribonucleoside hydrolase (cytidine/uridine-specific hydrolase) | NCTC8985_02379 | Not Available | Positive | 1733254 - 1734189 | 33808.9 |
| chaperone protein | NCTC8985_02380 | Not Available | Positive | 1734272 - 1735942 | 61879.7 |
| hsc56 co-chaperone of hscc | NCTC8985_02381 | Not Available | Negative | 1736002 - 1737453 | 55645.1 |
| putative trna ligase | NCTC8985_02382 | Not Available | Negative | 1737450 - 1738157 | 27005.8 |
| outer membrane protein | NCTC8985_02383 | Not Available | Positive | 1738259 - 1738813 | 20955.0 |
| dnaj-class chaperone | NCTC8985_02384 | Not Available | Negative | 1738823 - 1740250 | 55309.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





