Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8985 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215265 bp
Thymine Count
1216631 bp
Guanine Count
1251908 bp
Cytosine Count
1249317 bp
Genome Length
4933121 bp
Protein-coding Genes
6202 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine/proton symporter: putrescine/ornithine antiporter | NCTC8985_02334 | Not Available | Positive | 1701520 - 1701873 | 12678.9 |
| phosphoglucomutase | NCTC8985_02335 | Not Available | Negative | 1701929 - 1703569 | 58364.2 |
| negative modulator of initiation of replication | NCTC8985_02336 | Not Available | Negative | 1703595 - 1703927 | 12539.1 |
| putative esterase/lipase | NCTC8985_02337 | Not Available | Positive | 1704541 - 1704819 | 9912.05 |
| putative esterase/lipase | NCTC8985_02338 | Not Available | Positive | 1704892 - 1704996 | 3780.47 |
| lexa regulated protein | NCTC8985_02339 | Not Available | Positive | 1705146 - 1705508 | 13884.0 |
| flavodoxin 1 | NCTC8985_02340 | Not Available | Positive | 1705950 - 1706177 | 8452.87 |
| ferric uptake regulation protein | NCTC8985_02341 | Not Available | Positive | 1706466 - 1706912 | 16795.8 |
| putative lipoprotein | NCTC8985_02342 | Not Available | Negative | 1706996 - 1707322 | 11999.3 |
| outer membrane protein ybfm | NCTC8985_02343 | Not Available | Negative | 1707372 - 1708778 | 52748.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





