Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8985 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215265 bp
Thymine Count
1216631 bp
Guanine Count
1251908 bp
Cytosine Count
1249317 bp
Genome Length
4933121 bp
Protein-coding Genes
6202 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein ybip | NCTC8985_02152 | Not Available | Positive | 1569734 - 1571317 | 59699.3 |
| outer membrane protein x | NCTC8985_02153 | Not Available | Negative | 1571366 - 1571881 | 18603.6 |
| threonine and homoserine efflux system | NCTC8985_02154 | Not Available | Positive | 1572234 - 1573121 | 31184.4 |
| dna starvation/stationary phase protection protein dps | NCTC8985_02155 | Not Available | Positive | 1573420 - 1573923 | 18696.3 |
| glutamine abc transporter, substrate-binding protein | NCTC8985_02156 | Not Available | Positive | 1574326 - 1575135 | 28989.8 |
| glutamine transport system permease | NCTC8985_02157 | Not Available | Positive | 1575210 - 1575869 | 24365.8 |
| glnq protein, subunit of glutamine abc transporter | NCTC8985_02158 | Not Available | Positive | 1575866 - 1576588 | 26733.6 |
| membrane protein ybio | NCTC8985_02159 | Not Available | Positive | 1576706 - 1577455 | 27812.1 |
| membrane protein ybio | NCTC8985_02160 | Not Available | Positive | 1577527 - 1578930 | 51089.9 |
| sam-dependent methyltransferase | NCTC8985_02161 | Not Available | Negative | 1578927 - 1579853 | 34181.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





