Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8985 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215265 bp
Thymine Count
1216631 bp
Guanine Count
1251908 bp
Cytosine Count
1249317 bp
Genome Length
4933121 bp
Protein-coding Genes
6202 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine abc transporter, substrate-binding protein | NCTC8985_02081 | Not Available | Positive | 1519368 - 1519799 | 15840.8 |
| arginine transporter subunit | NCTC8985_02082 | Not Available | Positive | 1519792 - 1520100 | 11497.5 |
| arginine transport system permease | NCTC8985_02083 | Not Available | Positive | 1520107 - 1520823 | 26218.7 |
| arginine abc transporter permease | NCTC8985_02084 | Not Available | Positive | 1520823 - 1521491 | 24915.3 |
| arginine/ornithine abc transporter substrate-binding protein | NCTC8985_02085 | Not Available | Positive | 1521783 - 1522514 | 26857.9 |
| 23s rrna (uracil-5-)-methyltransferase | NCTC8985_02086 | Not Available | Negative | 1522689 - 1523816 | 41949.1 |
| inner membrane protein | NCTC8985_02087 | Not Available | Negative | 1523857 - 1524345 | 18519.1 |
| putrescine abc transporter membrane protein | NCTC8985_02088 | Not Available | Negative | 1524405 - 1525250 | 30523.4 |
| putrescine abc transporter membrane protein | NCTC8985_02089 | Not Available | Negative | 1525247 - 1526200 | 35518.7 |
| putrescine abc transporter atp-binding protein | NCTC8985_02090 | Not Available | Negative | 1526210 - 1527343 | 41956.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





