Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8985 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1215265 bp
Thymine Count
1216631 bp
Guanine Count
1251908 bp
Cytosine Count
1249317 bp
Genome Length
4933121 bp
Protein-coding Genes
6202 genes
Non-Coding Genes
346 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit | NCTC8985_02051 | Not Available | Negative | 1497036 - 1498277 | 45864.4 |
| atp-dependent clp protease atp-binding subunit | NCTC8985_02052 | Not Available | Negative | 1498779 - 1499084 | 11250.4 |
| atp-dependent clp protease adaptor protein | NCTC8985_02053 | Not Available | Negative | 1499115 - 1499435 | 12179.7 |
| stationary phase/starvation inducible regulatory protein cspd | NCTC8985_02054 | Not Available | Positive | 1499759 - 1499983 | 7969.41 |
| macrolide export atp-binding/permease protein | NCTC8985_02055 | Not Available | Negative | 1500056 - 1502002 | 70690.8 |
| macrolide-specific efflux protein | NCTC8985_02056 | Not Available | Negative | 1501999 - 1503114 | 40688.4 |
| virulence protein | NCTC8985_02057 | Not Available | Positive | 1503229 - 1504221 | 38277.7 |
| nucleoside triphosphate hydrolase domain | NCTC8985_02058 | Not Available | Negative | 1504218 - 1504664 | 16732.5 |
| nucleoside triphosphate hydrolase domain | NCTC8985_02059 | Not Available | Negative | 1504606 - 1505877 | 48839.9 |
| aquaporin z | NCTC8985_02060 | Not Available | Positive | 1506303 - 1506998 | 23704.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





