Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit delta | NCTC13127_06466 | Not Available | Positive | 5599126 - 5599659 | 19361.4 |
| atp synthase subunit alpha | NCTC13127_06467 | Not Available | Positive | 5599672 - 5601213 | 55225.4 |
| membrane-bound atp synthase f1 sector gamma-subunit | NCTC13127_06468 | Not Available | Positive | 5601264 - 5602127 | 31579.3 |
| atp synthase subunit beta | NCTC13127_06469 | Not Available | Positive | 5602154 - 5603536 | 50328.5 |
| membrane-bound atp synthase | NCTC13127_06470 | Not Available | Positive | 5603557 - 5603976 | 15069.2 |
| bifunctional protein glmu | NCTC13127_06472 | Not Available | Positive | 5604328 - 5605617 | 46573.7 |
| glucosamine--fructose-6-phosphate aminotransferase | NCTC13127_06473 | Not Available | Positive | 5605861 - 5607690 | 66912.4 |
| fimbrial protein | NCTC13127_06474 | Not Available | Positive | 5608390 - 5608992 | 20889.2 |
| fimbrial chaperone | NCTC13127_06475 | Not Available | Positive | 5609096 - 5609479 | 14569.1 |
| fimbrial usher protein | NCTC13127_06476 | Not Available | Positive | 5609803 - 5610210 | 15017.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





