Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | NCTC13127_06446 | Not Available | Positive | 5578202 - 5578894 | 26077.5 |
| major facilitator superfamily protein | NCTC13127_06447 | Not Available | Positive | 5578917 - 5580344 | 51416.9 |
| ribose operon repressor | NCTC13127_06448 | Not Available | Negative | 5580310 - 5581302 | 36614.1 |
| ribokinase | NCTC13127_06449 | Not Available | Negative | 5581306 - 5582235 | 32292.4 |
| d-ribose transporter subunit rbsb | NCTC13127_06450 | Not Available | Negative | 5582361 - 5583251 | 30940.2 |
| high-affinity ribose transport system permease protein rbsc | NCTC13127_06451 | Not Available | Negative | 5583276 - 5584241 | 33454.0 |
| high affinity ribose transport atp-binding protein rbsa | NCTC13127_06452 | Not Available | Negative | 5584246 - 5585751 | 55018.9 |
| d-ribose high-affinity transporter | NCTC13127_06453 | Not Available | Negative | 5585759 - 5586178 | 15293.4 |
| kup system potassium uptake protein | NCTC13127_06454 | Not Available | Negative | 5586345 - 5588213 | 69355.4 |
| regulatory atpase rava | NCTC13127_06455 | Not Available | Positive | 5588436 - 5589932 | 56391.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





