Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid phosphatase/phosphotransferase | NCTC13127_06051 | Not Available | Negative | 5217538 - 5218251 | 26090.9 |
| uncharacterised protein | NCTC13127_06052 | Not Available | Positive | 5218652 - 5219011 | 13862.5 |
| aromatic amino acid aminotransferase | NCTC13127_06053 | Not Available | Negative | 5219350 - 5220543 | 43507.2 |
| alanine racemase | NCTC13127_06054 | Not Available | Negative | 5220796 - 5221764 | 35277.4 |
| alanine racemase | NCTC13127_06055 | Not Available | Negative | 5221718 - 5221876 | 5767.21 |
| yjbl | NCTC13127_06077 | Not Available | Negative | 5237205 - 5238161 | 36195.0 |
| zinc uptake regulation protein | NCTC13127_06078 | Not Available | Positive | 5238480 - 5238995 | 19241.2 |
| putative general stress response protein | NCTC13127_06079 | Not Available | Negative | 5239037 - 5239246 | 8325.67 |
| dna-damage-inducible sos response protein | NCTC13127_06080 | Not Available | Negative | 5239362 - 5240687 | 47682.0 |
| lexa repressor | NCTC13127_06081 | Not Available | Negative | 5240760 - 5241368 | 22359.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





