Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tartrate/fumarate subfamily fe-s type hydro-lyase subunit beta | NCTC13127_05968 | Not Available | Positive | 5139026 - 5140672 | 60142.9 |
| putative inner membrane protein | NCTC13127_05969 | Not Available | Positive | 5140795 - 5141424 | 23372.4 |
| melibiose:sodium symporter | NCTC13127_05970 | Not Available | Negative | 5141563 - 5142972 | 52194.9 |
| alpha-galactosidase | NCTC13127_05971 | Not Available | Negative | 5143087 - 5144442 | 50572.8 |
| melibiose operon regulatory protein | NCTC13127_05972 | Not Available | Positive | 5144725 - 5145633 | 34942.0 |
| biodegradative arginine decarboxylase | NCTC13127_05973 | Not Available | Positive | 5145829 - 5148099 | 84545.0 |
| arac family transcriptional regulator | NCTC13127_05974 | Not Available | Positive | 5148424 - 5149185 | 29022.4 |
| arginine/agmatine antiporter | NCTC13127_05975 | Not Available | Positive | 5149322 - 5150659 | 46845.3 |
| cell division protein | NCTC13127_05976 | Not Available | Positive | 5150763 - 5152406 | 61670.6 |
| dna-binding transcriptional regulator basr | NCTC13127_05977 | Not Available | Positive | 5152403 - 5153071 | 25002.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





