Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysq protein | NCTC13127_05853 | Not Available | Negative | 5047786 - 5048526 | 27161.3 |
| bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein | NCTC13127_05854 | Not Available | Positive | 5048716 - 5050659 | 70909.0 |
| putative transcriptional regulator ytfh | NCTC13127_05855 | Not Available | Negative | 5050777 - 5051157 | 14076.0 |
| nad(p)h:quinone oxidoreductase | NCTC13127_05856 | Not Available | Positive | 5051246 - 5052106 | 29827.3 |
| membrane protein ytff | NCTC13127_05857 | Not Available | Positive | 5052214 - 5052642 | 15762.0 |
| membrane protein ytff | NCTC13127_05858 | Not Available | Positive | 5052629 - 5053180 | 20307.3 |
| regulator of cell morphogenesis and no signaling | NCTC13127_05859 | Not Available | Positive | 5053288 - 5053587 | 10926.9 |
| regulator of cell morphogenesis and no signaling | NCTC13127_05860 | Not Available | Positive | 5053529 - 5053951 | 15915.3 |
| d-serine/d-alanine/glycine transporter | NCTC13127_05861 | Not Available | Negative | 5053996 - 5054547 | 20060.5 |
| d-serine/d-alanine/glycine transporter | NCTC13127_05862 | Not Available | Negative | 5054555 - 5054980 | 15390.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





