Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acetyltransferase | NCTC13127_05811 | Not Available | Positive | 5005844 - 5006347 | 18576.4 |
| rnase e inhibitor protein | NCTC13127_05812 | Not Available | Negative | 5006393 - 5006809 | 15603.5 |
| ornithine carbamoyltransferase 1 | NCTC13127_05813 | Not Available | Positive | 5007267 - 5007974 | 25965.0 |
| protein | NCTC13127_05814 | Not Available | Negative | 5008031 - 5009767 | 67290.4 |
| toxin-antitoxin biofilm protein | NCTC13127_05815 | Not Available | Negative | 5009890 - 5010342 | 16896.3 |
| tetr family transcriptional regulator | NCTC13127_05816 | Not Available | Negative | 5010487 - 5011080 | 21327.5 |
| putative short chain dehydrogenase | NCTC13127_05817 | Not Available | Positive | 5011151 - 5011846 | 24674.7 |
| putative endoribonuclease | NCTC13127_05818 | Not Available | Positive | 5011996 - 5012352 | 13125.3 |
| aspartate carbamoyltransferase | NCTC13127_05819 | Not Available | Positive | 5012811 - 5013746 | 34429.3 |
| aspartate carbamoyltransferase regulatory subunit | NCTC13127_05820 | Not Available | Positive | 5013759 - 5014220 | 17121.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





