Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-mannonate oxidoreductase, nad-binding | NCTC13127_05751 | Not Available | Negative | 4930469 - 4931929 | 53659.3 |
| mannonate dehydratase | NCTC13127_05752 | Not Available | Negative | 4932010 - 4933194 | 44807.4 |
| high-affinity gluconate transporter | NCTC13127_05753 | Not Available | Positive | 4933534 - 4934877 | 47141.0 |
| fimh protein | NCTC13127_05754 | Not Available | Negative | 4935051 - 4935953 | 31461.2 |
| p pilus assembly protein, pilin fima | NCTC13127_05755 | Not Available | Negative | 4935973 - 4936476 | 17385.4 |
| fimf protein | NCTC13127_05756 | Not Available | Negative | 4936489 - 4937019 | 18716.3 |
| outer membrane usher protein fimd | NCTC13127_05757 | Not Available | Negative | 4937029 - 4939665 | 96602.9 |
| type i fimbrial chaperone | NCTC13127_05758 | Not Available | Negative | 4939732 - 4940241 | 18814.9 |
| type i fimbrial chaperone | NCTC13127_05759 | Not Available | Negative | 4940245 - 4940457 | 7606.4 |
| type-1 fimbrial protein fimi | NCTC13127_05760 | Not Available | Negative | 4940494 - 4940991 | 17647.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





