Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance protein | NCTC13127_05731 | Not Available | Positive | 4908037 - 4909269 | 44526.0 |
| inner membrane protein | NCTC13127_05732 | Not Available | Positive | 4909310 - 4910581 | 47787.2 |
| 2-hydroxyglutaryl-coa dehydratase | NCTC13127_05733 | Not Available | Positive | 4910697 - 4911848 | 42760.3 |
| atpase, activator of (r)-hydroxyglutaryl-coa dehydratase | NCTC13127_05734 | Not Available | Positive | 4911858 - 4912625 | 27333.9 |
| protein of uncharacterised function (duf3343) | NCTC13127_05735 | Not Available | Positive | 4912622 - 4912888 | 9891.88 |
| non-lee-encoded type iii secreted effector | NCTC13127_05736 | Not Available | Positive | 4913200 - 4915389 | 82867.8 |
| sdia-regulated protein | NCTC13127_05737 | Not Available | Positive | 4915655 - 4916497 | 31493.6 |
| major facilitator family transporter | NCTC13127_05738 | Not Available | Positive | 4916565 - 4917743 | 41307.0 |
| invasin | NCTC13127_05739 | Not Available | Positive | 4917954 - 4918739 | 28924.6 |
| invasin | NCTC13127_05740 | Not Available | Positive | 4918796 - 4923193 | 156888.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





