Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase-associated protein | NCTC13127_05577 | Not Available | Positive | 4773002 - 4775908 | 109775.0 |
| ribosomal large subunit pseudouridine synthase a | NCTC13127_05578 | Not Available | Positive | 4775920 - 4776579 | 24862.1 |
| non-lee-encoded type iii effector | NCTC13127_05579 | Not Available | Negative | 4776997 - 4777749 | 28097.7 |
| dna-j like membrane chaperone protein | NCTC13127_05580 | Not Available | Negative | 4778044 - 4778859 | 30567.2 |
| organic solvent tolerance protein | NCTC13127_05581 | Not Available | Positive | 4779114 - 4781468 | 89664.8 |
| chaperone precursor (peptidyl-prolyl cis-trans isomerase) | NCTC13127_05582 | Not Available | Positive | 4781521 - 4782807 | 47286.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | NCTC13127_05583 | Not Available | Positive | 4782807 - 4783796 | 35210.9 |
| dimethyladenosine transferase (s-adenosylmethionine-6-n',n'-adenosyl (rrna) dimethyltransferase) | NCTC13127_05584 | Not Available | Positive | 4783793 - 4784614 | 30456.0 |
| apag protein | NCTC13127_05585 | Not Available | Positive | 4784617 - 4784994 | 13867.6 |
| bis(5'-nucleosyl)-tetraphosphatase | NCTC13127_05586 | Not Available | Positive | 4785001 - 4785849 | 31498.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





