Escherichia coli strain NCTC13127

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain NCTC13127 is a Gram-negative, rod-shaped bacterium that demonstrates mobility due to the presence of flagella. As a facultative anaerobe, it can thrive in both aerobic and anaerobic environments, with an optimal growth temperature of 37°C, categorizing it as mesophilic. This strain is host-associated, exhibiting a biotic relationship that allows it to be free-living within various hosts, including Homo sapiens, Gallus gallus, Bos taurus, and numerous other vertebrates and invertebrates. E. coli NCTC13127 is notably associated with a wide range of health effects, particularly in humans, where it is linked to urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and severe conditions such as hemolytic uremic syndrome (HUS) and septicemia. The strain's ability to cause diverse health issues underscores its pathogenic potential and significance in clinical microbiology. The extensive list of hosts indicates that this strain may play a role in various ecological niches, influencing both animal and human health. Its presence in multiple species, including domesticated animals and wild fauna, suggests a complex ecological interaction, potentially impacting food safety and zoonotic disease transmission. Understanding the pathogenic mechanisms of E. coli NCTC13127 could provide insights into preventing infections and managing health risks associated with this versatile bacterium.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain NCTC13127

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain NCTC13127
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain NCTC13127 genome assembly, contig:

Gene Summary

Adenine Count

1416203 bp

Thymine Count

1415698 bp

Guanine Count

1443257 bp

Cytosine Count

1436732 bp

Genome Length

5711890 bp

Protein-coding Genes

5494 genes

Non-Coding Genes

985 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Ning proteinNCTC13127_01608Not AvailablePositive1393282 - 139389324271.1
Nini proteinNCTC13127_01609Not AvailablePositive1393890 - 139455525099.2
Late gene regulator qNCTC13127_01610Not AvailablePositive1394552 - 139517522460.1
membrane proteinNCTC13127_01611Not AvailablePositive1395428 - 139617128469.1
Hypothetical proteinNCTC13127_01613Not AvailablePositive1396832 - 139864364486.3
Holin protein s-like proteinNCTC13127_01614Not AvailablePositive1398834 - 13990497992.79
Hypothetical proteinNCTC13127_01615Not AvailablePositive1399054 - 139939812392.2
Putative endolysinNCTC13127_01616Not AvailablePositive1399449 - 13996798000.72
Truncated transposaseNCTC13127_01617Not AvailablePositive1399755 - 140013514071.0
TransposaseNCTC13127_01618Not AvailablePositive1400132 - 140047912771.9

Displaying genes 31 – 40 of 6479 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total