Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-tartrate dehydratase subunit alpha | NCTC13127_01048 | Not Available | Positive | 925010 - 925921 | 32678.4 |
| l-tartrate dehydratase subunit beta | NCTC13127_01049 | Not Available | Positive | 925918 - 926523 | 22703.8 |
| putative tartrate carrier protein | NCTC13127_01050 | Not Available | Positive | 926572 - 928035 | 52882.5 |
| o-sialoglycoprotein endopeptidase | NCTC13127_01051 | Not Available | Negative | 928078 - 929091 | 36009.5 |
| 30s ribosomal protein s21 | NCTC13127_01052 | Not Available | Positive | 929329 - 929544 | 8500.42 |
| dna primase | NCTC13127_01053 | Not Available | Positive | 929655 - 931400 | 65568.5 |
| rna polymerase | NCTC13127_01054 | Not Available | Positive | 931595 - 933436 | 70211.2 |
| g/u mismatch-specific dna glycosylase | NCTC13127_01055 | Not Available | Negative | 933515 - 934021 | 18655.4 |
| Trna-met | Not Available | Not Available | Positive | 934146 - 934221 | Not Available |
| siderophore-interacting protein | NCTC13127_01057 | Not Available | Negative | 934275 - 935039 | 28859.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





