Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Endolysin | NCTC13127_02367 | Not Available | Positive | 2039163 - 2039981 | 31570.6 |
| Putative zinc-containing alcohol dehydrogenase superfamily protein | NCTC13127_02379 | Not Available | Positive | 2049931 - 2050971 | 37407.2 |
| Putative deor transcriptional regulator ygbi | NCTC13127_02380 | Not Available | Positive | 2051071 - 2051850 | 27946.9 |
| lipid kinase | NCTC13127_02381 | Not Available | Negative | 2051932 - 2052831 | 31989.6 |
| protein | NCTC13127_02382 | Not Available | Positive | 2053237 - 2053554 | 11379.8 |
| Attl | Not Available | Not Available | Positive | 2053712 - 2053739 | Not Available |
| Integrase | NCTC13127_02383 | Not Available | Negative | 2053819 - 2054832 | 38336.3 |
| Gpc | NCTC13127_02384 | Not Available | Negative | 2054948 - 2055247 | 11018.1 |
| Cox | NCTC13127_02385 | Not Available | Positive | 2055362 - 2055637 | 10301.5 |
| Hypothetical protein | NCTC13127_02386 | Not Available | Positive | 2055648 - 2055818 | 6560.28 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





