Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium uptake protein trka | NCTC13127_00803 | Not Available | Negative | 710730 - 711341 | 22263.3 |
| ribosomal rna small subunit methyltransferase b | NCTC13127_00804 | Not Available | Negative | 711374 - 712207 | 31414.8 |
| ribosomal rna small subunit methyltransferase b | NCTC13127_00805 | Not Available | Negative | 712242 - 712652 | 15466.2 |
| methionyl-trna formyltransferase | NCTC13127_00806 | Not Available | Negative | 712698 - 713504 | 29125.3 |
| polypeptide deformylase | NCTC13127_00807 | Not Available | Negative | 713662 - 713871 | 8072.06 |
| polypeptide deformylase | NCTC13127_00808 | Not Available | Negative | 713871 - 714101 | 8608.49 |
| dna protecting protein dpra | NCTC13127_00809 | Not Available | Positive | 714299 - 715249 | 35041.3 |
| protein smg | NCTC13127_00810 | Not Available | Positive | 715394 - 715867 | 18484.2 |
| putative dna topoisomerase | NCTC13127_00811 | Not Available | Positive | 715896 - 716324 | 15692.9 |
| ribosome maturation factor | NCTC13127_00812 | Not Available | Positive | 716442 - 717014 | 20669.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





