Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fimbrial assembly protein | NCTC13127_00702 | Not Available | Positive | 648719 - 649258 | 20853.2 |
| protein involved in utilization of dna as a carbon source | NCTC13127_00703 | Not Available | Positive | 649242 - 649682 | 17020.3 |
| protein involved in utilization of dna as a carbon source | NCTC13127_00704 | Not Available | Positive | 649672 - 650076 | 15115.1 |
| outer membrane porin hofq | NCTC13127_00705 | Not Available | Positive | 650018 - 651226 | 43578.4 |
| shikimate kinase i | NCTC13127_00706 | Not Available | Positive | 651471 - 652148 | 25230.0 |
| 3-dehydroquinate synthase | NCTC13127_00707 | Not Available | Positive | 652205 - 653293 | 38886.3 |
| damx protein | NCTC13127_00708 | Not Available | Positive | 653385 - 654671 | 46106.2 |
| dna adenine methylase | NCTC13127_00709 | Not Available | Positive | 654778 - 655614 | 32101.2 |
| ribulose-phosphate 3-epimerase | NCTC13127_00710 | Not Available | Positive | 655632 - 656309 | 24555.7 |
| phosphoglycolate phosphatase | NCTC13127_00711 | Not Available | Positive | 656302 - 657060 | 27348.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





