Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shuy-like protein | NCTC13127_00525 | Not Available | Negative | 487353 - 487976 | 21813.1 |
| shux-like protein | NCTC13127_00526 | Not Available | Negative | 487976 - 488470 | 18329.8 |
| putative oxygen independent coproporphyrinogen iii oxidase | NCTC13127_00527 | Not Available | Negative | 488483 - 489820 | 49552.1 |
| periplasmic binding protein | NCTC13127_00528 | Not Available | Negative | 489840 - 490754 | 32780.9 |
| uncharacterised protein | NCTC13127_00529 | Not Available | Positive | 490877 - 491161 | 11352.0 |
| hemin tonb-dependent receptor | NCTC13127_00530 | Not Available | Positive | 491437 - 493419 | 72505.0 |
| putative hemin-degrading protein | NCTC13127_00531 | Not Available | Positive | 493468 - 493719 | 9578.41 |
| putative hemin-degrading protein | NCTC13127_00532 | Not Available | Positive | 493734 - 494495 | 28532.9 |
| transcriptional regulator | NCTC13127_00533 | Not Available | Negative | 494556 - 495086 | 20452.5 |
| slp family outer membrane lipoprotein | NCTC13127_00534 | Not Available | Negative | 495242 - 495808 | 20949.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





