Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | NCTC13127_00431 | Not Available | Positive | 387112 - 387435 | 12409.3 |
| hlyd-family secretion protein | NCTC13127_00432 | Not Available | Positive | 387441 - 388577 | 41772.6 |
| lysr family transcriptional regulator | NCTC13127_00433 | Not Available | Negative | 388574 - 389548 | 37301.5 |
| putative scaffolding protein | NCTC13127_00434 | Not Available | Positive | 389672 - 390412 | 27370.9 |
| ybl149 | NCTC13127_00435 | Not Available | Negative | 390542 - 392512 | 75043.0 |
| permease | NCTC13127_00436 | Not Available | Negative | 392523 - 393923 | 51389.9 |
| arac family transcriptional regulator | NCTC13127_00437 | Not Available | Positive | 394149 - 394964 | 31525.1 |
| electron transport protein ysaa | NCTC13127_00438 | Not Available | Positive | 395208 - 395681 | 17435.1 |
| class i and ii aminotransferase | NCTC13127_00439 | Not Available | Negative | 395834 - 397087 | 46689.9 |
| alpha-amylase | NCTC13127_00440 | Not Available | Negative | 397265 - 399091 | 68372.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





