Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii effector protein | NCTC13127_00329 | Not Available | Positive | 280265 - 280876 | 22925.3 |
| translocated intimin receptor tir | NCTC13127_00330 | Not Available | Positive | 281300 - 282928 | 56387.1 |
| chaperone cest | NCTC13127_00331 | Not Available | Positive | 283113 - 283583 | 17681.9 |
| intimin c-type lectin domain-containing protein | NCTC13127_00332 | Not Available | Positive | 283643 - 286447 | 101841.0 |
| t3ss structure protein escd | NCTC13127_00333 | Not Available | Negative | 286711 - 287931 | 45261.8 |
| secretion switching protein sepl | NCTC13127_00334 | Not Available | Positive | 288074 - 289129 | 39954.0 |
| protein espa | NCTC13127_00335 | Not Available | Positive | 289188 - 289766 | 20575.2 |
| protein espd | NCTC13127_00336 | Not Available | Positive | 289779 - 290903 | 39085.5 |
| protein espb | NCTC13127_00337 | Not Available | Positive | 290924 - 291862 | 32632.4 |
| chaperone cesd2 | NCTC13127_00338 | Not Available | Positive | 291869 - 292276 | 15813.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





