Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t3ss structure protein escr | NCTC13127_00309 | Not Available | Positive | 264922 - 265575 | 24384.0 |
| escs | NCTC13127_00310 | Not Available | Positive | 265575 - 265739 | 6025.65 |
| t3ss structure protein esct | NCTC13127_00311 | Not Available | Positive | 265843 - 266619 | 28718.9 |
| t3ss structure protein escu | NCTC13127_00312 | Not Available | Positive | 266612 - 267649 | 39193.5 |
| transglycosylase slt domain protein | NCTC13127_00313 | Not Available | Negative | 267646 - 268104 | 17078.5 |
| negative regulator grlr | NCTC13127_00314 | Not Available | Positive | 268300 - 268671 | 13929.9 |
| positive regulator grla | NCTC13127_00315 | Not Available | Positive | 268726 - 269139 | 16085.4 |
| chaperone cesd | NCTC13127_00316 | Not Available | Negative | 269523 - 269978 | 17503.7 |
| t3ss structure protein escc | NCTC13127_00317 | Not Available | Negative | 269992 - 271530 | 56201.9 |
| secretion switching protein sepd | NCTC13127_00318 | Not Available | Negative | 271530 - 271985 | 17562.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





