Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trat transfer protein | NCTC13127_00237 | Not Available | Negative | 206042 - 206281 | 9112.95 |
| tras transfer protein | NCTC13127_00238 | Not Available | Negative | 206265 - 206453 | 7057.09 |
| trar | NCTC13127_00239 | Not Available | Negative | 206568 - 206921 | 12797.2 |
| inci1 conjugal transfer protein traq | NCTC13127_00240 | Not Available | Negative | 207134 - 207259 | 4184.0 |
| inci1 conjugal transfer protein traq | NCTC13127_00241 | Not Available | Negative | 207276 - 207494 | 7911.6 |
| trap | NCTC13127_00242 | Not Available | Negative | 207466 - 207621 | 5687.63 |
| trap | NCTC13127_00243 | Not Available | Negative | 207702 - 207836 | 5352.25 |
| trap | NCTC13127_00244 | Not Available | Negative | 207936 - 208190 | 9223.07 |
| trao-like protein | NCTC13127_00245 | Not Available | Negative | 209077 - 209469 | 13572.0 |
| protein tran | NCTC13127_00246 | Not Available | Negative | 209522 - 210454 | 33385.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





