Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein, trbc | NCTC13127_00216 | Not Available | Negative | 186700 - 188991 | 86846.8 |
| conjugal transfer protein, trbb | NCTC13127_00217 | Not Available | Negative | 188984 - 190054 | 39537.4 |
| conjugal transfer protein | NCTC13127_00218 | Not Available | Negative | 190073 - 191281 | 46049.1 |
| uncharacterised protein | NCTC13127_00219 | Not Available | Negative | 192047 - 192451 | 15255.1 |
| uncharacterised protein | NCTC13127_00221 | Not Available | Negative | 193277 - 193528 | 9297.11 |
| transposase | NCTC13127_00222 | Not Available | Positive | 193756 - 194778 | 39857.1 |
| insertion sequence is100, atp-binding protein | NCTC13127_00223 | Not Available | Positive | 194778 - 195557 | 29296.6 |
| uncharacterised protein | NCTC13127_00224 | Not Available | Positive | 195986 - 196081 | 3371.45 |
| uncharacterised protein | NCTC13127_00225 | Not Available | Negative | 196146 - 196322 | 6821.21 |
| uncharacterised protein | NCTC13127_00226 | Not Available | Positive | 196714 - 196923 | 7746.56 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





