Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid protein | NCTC13127_00195 | Not Available | Positive | 169283 - 169474 | 7236.73 |
| uncharacterised protein | NCTC13127_00196 | Not Available | Negative | 169666 - 170322 | 22932.8 |
| rna-directed dna polymerase (reverse transcriptase) domain protein | NCTC13127_00197 | Not Available | Positive | 170897 - 172798 | 72580.4 |
| single-strand binding protein | NCTC13127_00199 | Not Available | Positive | 172993 - 173433 | 16248.0 |
| conserved putative protein | NCTC13127_00200 | Not Available | Positive | 173491 - 173724 | 9034.56 |
| parb-like nuclease | NCTC13127_00201 | Not Available | Positive | 173693 - 175741 | 74576.8 |
| plasmid sos inhibition protein b | NCTC13127_00202 | Not Available | Positive | 175796 - 176230 | 15864.0 |
| plasmid sos inhibition protein a | NCTC13127_00203 | Not Available | Positive | 176227 - 176946 | 27664.9 |
| ygaa | NCTC13127_00204 | Not Available | Positive | 176943 - 177539 | 22265.9 |
| antirestriction arda family protein | NCTC13127_00205 | Not Available | Positive | 178002 - 178502 | 19233.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





