Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilr protein | NCTC13127_00153 | Not Available | Negative | 135355 - 136452 | 41418.5 |
| type ii secretion system protein e | NCTC13127_00154 | Not Available | Negative | 136465 - 138018 | 58230.3 |
| type iv pilus biogenesis protein pilp | NCTC13127_00155 | Not Available | Negative | 138029 - 138481 | 16066.3 |
| pilo protein | NCTC13127_00156 | Not Available | Negative | 138468 - 139763 | 48032.5 |
| type ivb pilus formation outer membrane protein, r64 piln family | NCTC13127_00157 | Not Available | Negative | 139756 - 141438 | 59854.8 |
| pilm protein | NCTC13127_00158 | Not Available | Negative | 141452 - 141889 | 15718.0 |
| pill protein | NCTC13127_00159 | Not Available | Negative | 141889 - 142956 | 38537.9 |
| inci1 conjugal transfer protein pilk | NCTC13127_00160 | Not Available | Negative | 142990 - 143583 | 23350.0 |
| pilj protein | NCTC13127_00161 | Not Available | Negative | 143580 - 143876 | 11391.3 |
| pili protein | NCTC13127_00162 | Not Available | Negative | 144043 - 144297 | 9900.89 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





