Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC13127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1416203 bp
Thymine Count
1415698 bp
Guanine Count
1443257 bp
Cytosine Count
1436732 bp
Genome Length
5711890 bp
Protein-coding Genes
5494 genes
Non-Coding Genes
985 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative anti-restriction protein | NCTC13127_00018 | Not Available | Positive | 12951 - 13577 | 23603.3 |
| putative antirestriction protein | NCTC13127_00019 | Not Available | Positive | 13550 - 13972 | 16146.2 |
| ycja | NCTC13127_00020 | Not Available | Positive | 14015 - 14437 | 15695.6 |
| plasmid protein | NCTC13127_00021 | Not Available | Positive | 14434 - 14625 | 7236.73 |
| uncharacterised protein | NCTC13127_00022 | Not Available | Positive | 15622 - 15852 | 8582.57 |
| uncharacterised protein | NCTC13127_00023 | Not Available | Positive | 15904 - 16065 | 5937.03 |
| domain of uncharacterised function (duf3560) | NCTC13127_00024 | Not Available | Positive | 16120 - 17097 | 37039.7 |
| uncharacterised protein | NCTC13127_00025 | Not Available | Positive | 17094 - 17264 | 6573.9 |
| adenine-specific dna methylase | NCTC13127_00026 | Not Available | Positive | 17311 - 17544 | 8426.22 |
| adenine-specific dna methylase | NCTC13127_00027 | Not Available | Positive | 17537 - 17875 | 12864.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





