Escherichia coli strain NCTC10865

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain NCTC10865 is a Gram-negative, rod-shaped bacterium classified as a facultative anaerobe, capable of thriving in both aerobic and anaerobic environments. This strain exhibits mobility, facilitated by the presence of flagella, and typically forms pairs or exists as single cells. It is mesophilic, with an optimal growth temperature of 37°C. NCTC10865 is host-associated and displays a free-living biotic relationship. It has a diverse range of hosts, including Homo sapiens, various livestock such as Bos taurus and Sus scrofa, as well as other animals and even some plant species like Solanum lycopersicum and Brassica oleracea var. italica. This wide host range underscores its ecological adaptability. Clinically, NCTC10865 is associated with numerous health complications in humans, contributing to conditions such as urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis. It is implicated in severe health issues like hemorrhagic colitis and hemolytic uremic syndrome (HUS), highlighting its pathogenic nature. The strain can also cause infections in animals, including enteric diseases in calves and chronic mastitis in dairy cattle. The extensive range of health effects associated with E. coli NCTC10865 illustrates its significant role in both human and veterinary medicine. Its ability to inhabit various hosts and cause a multitude of diseases emphasizes the importance of monitoring and understanding this strain within ecological and public health contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain NCTC10865

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain NCTC10865
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain NCTC10865 genome assembly, contig:

Gene Summary

Adenine Count

1249599 bp

Thymine Count

1247756 bp

Guanine Count

1289080 bp

Cytosine Count

1284505 bp

Genome Length

5070940 bp

Protein-coding Genes

5892 genes

Non-Coding Genes

462 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Major capsid protein, p2 familyNCTC10865_00021Not AvailableNegative11586 - 1189111192.5
Major capsid protein, p2 familyNCTC10865_00022Not AvailableNegative11885 - 1263728104.1
Capsid scaffolding proteinNCTC10865_00023Not AvailableNegative12818 - 1349824820.2
Helix-turn-helix domain-containing proteinNCTC10865_00024Not AvailablePositive13653 - 1406015432.6
Helix-turn-helix domain-containing proteinNCTC10865_00025Not AvailablePositive13999 - 1469727045.1
Helix-turn-helix domain-containing proteinNCTC10865_00026Not AvailablePositive14648 - 148788798.32
Helix-turn-helix domain-containing proteinNCTC10865_00027Not AvailablePositive14832 - 1540720980.0
Pbsx family portal proteinNCTC10865_00028Not AvailablePositive15407 - 1612627501.8
Portal proteinNCTC10865_00029Not AvailablePositive16114 - 163538790.77
Portal capsid protein q (gpq)NCTC10865_00030Not AvailablePositive16353 - 164543849.66

Displaying genes 21 – 30 of 6354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total