Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8621 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296697 bp
Thymine Count
1303842 bp
Guanine Count
1332519 bp
Cytosine Count
1318136 bp
Genome Length
5251194 bp
Protein-coding Genes
4468 genes
Non-Coding Genes
800 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t3ss structure protein escd | NCTC8621_00131 | Not Available | Negative | 110839 - 112059 | 45288.8 |
| secretion switching protein sepl | NCTC8621_00132 | Not Available | Positive | 112202 - 113257 | 40004.0 |
| translocon espa | NCTC8621_00133 | Not Available | Positive | 113306 - 113875 | 20652.4 |
| translocon espd | NCTC8621_00134 | Not Available | Positive | 113888 - 115027 | 39480.8 |
| translocon espb | NCTC8621_00135 | Not Available | Positive | 115048 - 116010 | 33058.4 |
| chaperone cesd2 | NCTC8621_00136 | Not Available | Positive | 116017 - 116424 | 15772.8 |
| t3ss structure protein escf | NCTC8621_00137 | Not Available | Positive | 116461 - 116682 | 8127.69 |
| t3ss component | NCTC8621_00138 | Not Available | Positive | 116688 - 116966 | 10264.5 |
| lee-encoded effector espf | NCTC8621_00139 | Not Available | Positive | 117051 - 117671 | 20960.8 |
| Trna-sec(p) | Not Available | Not Available | Positive | 118574 - 118664 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





